Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Scn2aA0A0J9YTW6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Scn2aA0A0J9YTW6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm13534-201ENSMUST00000121169 513 ntBASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Scn2aA0A0J9YTW6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm29257-201ENSMUST00000186115 639 ntBASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Scn2aA0A0J9YTW6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scn2aA0A0J9YTW6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scn2aA0A0J9YTW6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scn2aA0A0J9YTW6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Gm6420-201ENSMUST00000193885 723 ntBASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scn2aA0A0J9YTW6 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.38■□□□□ 0.37
Scn2aA0A0J9YTW6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2aA0A0J9YTW6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn2aA0A0J9YTW6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms