Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav18A0A075B656 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav18A0A075B656 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav18A0A075B656 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav18A0A075B656 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav18A0A075B656 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav18A0A075B656 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav18A0A075B656 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav18A0A075B656 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Gm12251-201ENSMUST00000117893 792 ntBASIC15.5■□□□□ 0.07
Trav18A0A075B656 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav18A0A075B656 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.5■□□□□ 0.07
Trav18A0A075B656 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.5■□□□□ 0.07
Trav18A0A075B656 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav18A0A075B656 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav18A0A075B656 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC15.49■□□□□ 0.07
Trav18A0A075B656 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.49■□□□□ 0.07
Trav18A0A075B656 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.49■□□□□ 0.07
Trav18A0A075B656 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav18A0A075B656 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.48■□□□□ 0.07
Trav18A0A075B656 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav18A0A075B656 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.48■□□□□ 0.07
Trav18A0A075B656 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav18A0A075B656 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav18A0A075B656 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav18A0A075B656 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav18A0A075B656 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav18A0A075B656 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav18A0A075B656 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav18A0A075B656 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav18A0A075B656 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav18A0A075B656 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.46■□□□□ 0.07
Trav18A0A075B656 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav18A0A075B656 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.46■□□□□ 0.07
Trav18A0A075B656 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav18A0A075B656 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav18A0A075B656 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms