Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Gm12251-201ENSMUST00000117893 792 ntBASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-1A0A075B601 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-1A0A075B601 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-1A0A075B601 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-1A0A075B601 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-1A0A075B601 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-1A0A075B601 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-1A0A075B601 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 Gm21956-201ENSMUST00000179946 522 ntBASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-1A0A075B601 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-1A0A075B601 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-1A0A075B601 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 BC021767-201ENSMUST00000126387 1716 ntBASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-1A0A075B601 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Gm13241-201ENSMUST00000094493 780 ntBASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-1A0A075B601 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms