Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav6-1A0A075B5Z8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.23■□□□□ 0.03
Trav6-1A0A075B5Z8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav6-1A0A075B5Z8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav6-1A0A075B5Z8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-1A0A075B5Z8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-1A0A075B5Z8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trav6-1A0A075B5Z8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.21■□□□□ 0.02
Trav6-1A0A075B5Z8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Gm5812-201ENSMUST00000061073 957 ntBASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav6-1A0A075B5Z8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-1A0A075B5Z8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-1A0A075B5Z8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav6-1A0A075B5Z8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-1A0A075B5Z8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trav6-1A0A075B5Z8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms