Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.95■□□□□ 0.62
Mrpl40Q9Z2Q5 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Mrpl40Q9Z2Q5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mrpl40Q9Z2Q5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mrpl40Q9Z2Q5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mrpl40Q9Z2Q5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Mrpl40Q9Z2Q5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Mrpl40Q9Z2Q5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Mrpl40Q9Z2Q5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Mrpl40Q9Z2Q5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Mrpl40Q9Z2Q5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Mrpl40Q9Z2Q5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mrpl40Q9Z2Q5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mrpl40Q9Z2Q5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Mrpl40Q9Z2Q5 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Mrpl40Q9Z2Q5 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.89■□□□□ 0.62
Mrpl40Q9Z2Q5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Mrpl40Q9Z2Q5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Reep4-203ENSMUST00000226563 1444 ntBASIC18.88■□□□□ 0.61
Mrpl40Q9Z2Q5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms