Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Gm40848-201ENSMUST00000221998 324 ntBASIC16.81■□□□□ 0.28
Nubp2Q9R061 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nubp2Q9R061 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nubp2Q9R061 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Gm5874-201ENSMUST00000096101 508 ntBASIC16.79■□□□□ 0.28
Nubp2Q9R061 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nubp2Q9R061 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp2Q9R061 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp2Q9R061 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Gm11421-201ENSMUST00000122124 294 ntBASIC16.77■□□□□ 0.28
Nubp2Q9R061 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp2Q9R061 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.77■□□□□ 0.28
Nubp2Q9R061 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp2Q9R061 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp2Q9R061 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp2Q9R061 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Gm10493-201ENSMUST00000097270 612 ntBASIC16.76■□□□□ 0.27
Nubp2Q9R061 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Nubp2Q9R061 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Nubp2Q9R061 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp2Q9R061 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp2Q9R061 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Nubp2Q9R061 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.74■□□□□ 0.27
Nubp2Q9R061 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.74■□□□□ 0.27
Nubp2Q9R061 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp2Q9R061 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nubp2Q9R061 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nubp2Q9R061 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp2Q9R061 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms