Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Gm42778-201ENSMUST00000199644 553 ntBASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clcf1Q9QZM3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Gm9988-201ENSMUST00000069786 435 ntBASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.22■□□□□ 0.35
Clcf1Q9QZM3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 AA386476-201ENSMUST00000098781 1665 ntBASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 AV356131-201ENSMUST00000206201 750 ntBASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clcf1Q9QZM3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clcf1Q9QZM3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Clcf1Q9QZM3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.2■□□□□ 0.34
Clcf1Q9QZM3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Clcf1Q9QZM3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Reep4-203ENSMUST00000226563 1444 ntBASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcf1Q9QZM3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Gm13234-201ENSMUST00000120010 747 ntBASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.17■□□□□ 0.34
Clcf1Q9QZM3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms