Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpf2Q9JJ80 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rpf2Q9JJ80 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rpf2Q9JJ80 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.26■□□□□ 0.83
Rpf2Q9JJ80 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rpf2Q9JJ80 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rpf2Q9JJ80 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Golgb1-201ENSMUST00000023534 498 ntBASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rpf2Q9JJ80 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Rarb-207ENSMUST00000225921 2756 ntBASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
Rpf2Q9JJ80 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpf2Q9JJ80 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpf2Q9JJ80 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.21■□□□□ 0.83
Rpf2Q9JJ80 Gm45102-201ENSMUST00000207427 857 ntBASIC20.21■□□□□ 0.83
Rpf2Q9JJ80 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpf2Q9JJ80 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpf2Q9JJ80 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rpf2Q9JJ80 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rpf2Q9JJ80 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rpf2Q9JJ80 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Gm14117-201ENSMUST00000122417 843 ntBASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rpf2Q9JJ80 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms