Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rbfox1Q9JJ43 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Spcs1-204ENSMUST00000226782 949 ntBASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.16■□□□□ 0.18
Rbfox1Q9JJ43 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Rbfox1Q9JJ43 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rbfox1Q9JJ43 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
Rbfox1Q9JJ43 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rbfox1Q9JJ43 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rbfox1Q9JJ43 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Rarb-207ENSMUST00000225921 2756 ntBASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbfox1Q9JJ43 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbfox1Q9JJ43 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms