Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmgn3Q9DCB1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmgn3Q9DCB1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.89■□□□□ 0.46
Hmgn3Q9DCB1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmgn3Q9DCB1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Hmgn3Q9DCB1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmgn3Q9DCB1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmgn3Q9DCB1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmgn3Q9DCB1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Gm5921-201ENSMUST00000075898 882 ntBASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmgn3Q9DCB1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn3Q9DCB1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn3Q9DCB1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn3Q9DCB1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.85■□□□□ 0.45
Hmgn3Q9DCB1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn3Q9DCB1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hmgn3Q9DCB1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmgn3Q9DCB1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Gm13238-201ENSMUST00000117655 780 ntBASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Gm43566-201ENSMUST00000196851 808 ntBASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hmgn3Q9DCB1 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmgn3Q9DCB1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms