Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap53Q9D439 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.83■□□□□ 0.93
Cfap53Q9D439 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Cfap53Q9D439 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cfap53Q9D439 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cfap53Q9D439 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cfap53Q9D439 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cfap53Q9D439 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.83■□□□□ 0.92
Cfap53Q9D439 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cfap53Q9D439 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.82■□□□□ 0.92
Cfap53Q9D439 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Cfap53Q9D439 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cfap53Q9D439 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cfap53Q9D439 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cfap53Q9D439 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cfap53Q9D439 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cfap53Q9D439 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cfap53Q9D439 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Cfap53Q9D439 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cfap53Q9D439 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cfap53Q9D439 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cfap53Q9D439 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap53Q9D439 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap53Q9D439 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.78■□□□□ 0.92
Cfap53Q9D439 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Cfap53Q9D439 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Cfap53Q9D439 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap53Q9D439 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cfap53Q9D439 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap53Q9D439 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.77■□□□□ 0.92
Cfap53Q9D439 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cfap53Q9D439 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Cfap53Q9D439 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cfap53Q9D439 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.76■□□□□ 0.91
Cfap53Q9D439 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.76■□□□□ 0.91
Cfap53Q9D439 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cfap53Q9D439 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms