Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trim8Q99PJ2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Rarb-207ENSMUST00000225921 2756 ntBASIC18.6■□□□□ 0.57
Trim8Q99PJ2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim8Q99PJ2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Trim8Q99PJ2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim8Q99PJ2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim8Q99PJ2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim8Q99PJ2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trim8Q99PJ2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim8Q99PJ2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Trim8Q99PJ2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
Trim8Q99PJ2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Trim8Q99PJ2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim8Q99PJ2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trim8Q99PJ2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.58■□□□□ 0.56
Trim8Q99PJ2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim8Q99PJ2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim8Q99PJ2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim8Q99PJ2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trim8Q99PJ2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim8Q99PJ2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trim8Q99PJ2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trim8Q99PJ2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trim8Q99PJ2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.55■□□□□ 0.56
Trim8Q99PJ2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim8Q99PJ2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Serp2-204ENSMUST00000228055 705 ntBASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim8Q99PJ2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms