Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Prdm9Q96EQ9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Prdm9Q96EQ9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Prdm9Q96EQ9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Prdm9Q96EQ9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Prdm9Q96EQ9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Gm6365-201ENSMUST00000054711 744 ntBASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Prdm9Q96EQ9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Gm7290-201ENSMUST00000104990 617 ntBASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Gm12918-201ENSMUST00000120234 636 ntBASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Gm15710-201ENSMUST00000121821 636 ntBASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Gm5075-201ENSMUST00000196916 622 ntBASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Prdm9Q96EQ9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Prdm9Q96EQ9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms