Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdha1Q91Y21 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdha1Q91Y21 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdha1Q91Y21 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdha1Q91Y21 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Pcdha1Q91Y21 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha1Q91Y21 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha1Q91Y21 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Pcdha1Q91Y21 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.83■□□□□ 0.77
Pcdha1Q91Y21 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.83■□□□□ 0.77
Pcdha1Q91Y21 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdha1Q91Y21 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdha1Q91Y21 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Pcdha1Q91Y21 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Pcdha1Q91Y21 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Gm13534-201ENSMUST00000121169 513 ntBASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdha1Q91Y21 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.8■□□□□ 0.76
Pcdha1Q91Y21 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Pcdha1Q91Y21 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Pcdha1Q91Y21 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms