Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb21Q91V48 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb21Q91V48 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb21Q91V48 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb21Q91V48 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb21Q91V48 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Gm18284-201ENSMUST00000172604 624 ntBASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Gm42778-201ENSMUST00000199644 553 ntBASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Gm9988-201ENSMUST00000069786 435 ntBASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb21Q91V48 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Gm5874-201ENSMUST00000096101 508 ntBASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb21Q91V48 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.79■□□□□ 0.6
Pcdhb21Q91V48 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.78■□□□□ 0.6
Pcdhb21Q91V48 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Gm8495-201ENSMUST00000188740 694 ntBASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdhb21Q91V48 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms