Protein–RNA interactions for Protein: Q8VEJ4

Nle1, Notchless protein homolog 1, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nle1Q8VEJ4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nle1Q8VEJ4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Nle1Q8VEJ4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.73■□□□□ 0.75
Nle1Q8VEJ4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nle1Q8VEJ4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nle1Q8VEJ4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nle1Q8VEJ4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nle1Q8VEJ4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nle1Q8VEJ4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nle1Q8VEJ4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Mir5133-201ENSMUST00000174955 77 ntBASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nle1Q8VEJ4 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nle1Q8VEJ4 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Gm6365-201ENSMUST00000054711 744 ntBASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nle1Q8VEJ4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nle1Q8VEJ4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Gm7290-201ENSMUST00000104990 617 ntBASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Gm12918-201ENSMUST00000120234 636 ntBASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Gm15710-201ENSMUST00000121821 636 ntBASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Gm5075-201ENSMUST00000196916 622 ntBASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.67■□□□□ 0.74
Nle1Q8VEJ4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Nle1Q8VEJ4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nle1Q8VEJ4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms