Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim31Q8R0K2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim31Q8R0K2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Trim31Q8R0K2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim31Q8R0K2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Trim31Q8R0K2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trim31Q8R0K2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trim31Q8R0K2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim31Q8R0K2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim31Q8R0K2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim31Q8R0K2 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.52■□□□□ 0.56
Trim31Q8R0K2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
Trim31Q8R0K2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim31Q8R0K2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim31Q8R0K2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim31Q8R0K2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim31Q8R0K2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.52■□□□□ 0.55
Trim31Q8R0K2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim31Q8R0K2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim31Q8R0K2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim31Q8R0K2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Gm18284-201ENSMUST00000172604 624 ntBASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim31Q8R0K2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim31Q8R0K2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms