Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lin28aQ8K3Y3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Gm7860-201ENSMUST00000121190 879 ntBASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lin28aQ8K3Y3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.78■□□□□ 0.44
Lin28aQ8K3Y3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lin28aQ8K3Y3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Lin28aQ8K3Y3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Gm13146-201ENSMUST00000118508 780 ntBASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lin28aQ8K3Y3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lin28aQ8K3Y3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lin28aQ8K3Y3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lin28aQ8K3Y3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Gm6420-201ENSMUST00000193885 723 ntBASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lin28aQ8K3Y3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms