Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfwd3Q8CIK8 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.88■□□□□ 0.45
Rfwd3Q8CIK8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rfwd3Q8CIK8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rfwd3Q8CIK8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rfwd3Q8CIK8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rfwd3Q8CIK8 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Gm10493-201ENSMUST00000097270 612 ntBASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rfwd3Q8CIK8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Rfwd3Q8CIK8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Gm18284-201ENSMUST00000172604 624 ntBASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfwd3Q8CIK8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms