Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr7Q8BU04 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Ubr7Q8BU04 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr7Q8BU04 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr7Q8BU04 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ubr7Q8BU04 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ubr7Q8BU04 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubr7Q8BU04 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubr7Q8BU04 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ubr7Q8BU04 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ubr7Q8BU04 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.27■□□□□ 0.67
Ubr7Q8BU04 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Gm13148-201ENSMUST00000118892 745 ntBASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ubr7Q8BU04 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Gm6365-201ENSMUST00000054711 744 ntBASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Gm10602-201ENSMUST00000098239 609 ntBASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubr7Q8BU04 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Golph3-202ENSMUST00000226517 2359 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Gm7290-201ENSMUST00000104990 617 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Gm12918-201ENSMUST00000120234 636 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Gm15710-201ENSMUST00000121821 636 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Mir5133-201ENSMUST00000174955 77 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Gm5075-201ENSMUST00000196916 622 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.24■□□□□ 0.67
Ubr7Q8BU04 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ubr7Q8BU04 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ubr7Q8BU04 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ubr7Q8BU04 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms