Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nup54Q8BTS4 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup54Q8BTS4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Nup54Q8BTS4 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.53■□□□□ 0.72
Nup54Q8BTS4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.53■□□□□ 0.72
Nup54Q8BTS4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup54Q8BTS4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nup54Q8BTS4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nup54Q8BTS4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nup54Q8BTS4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nup54Q8BTS4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nup54Q8BTS4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup54Q8BTS4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup54Q8BTS4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup54Q8BTS4 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nup54Q8BTS4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nup54Q8BTS4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nup54Q8BTS4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nup54Q8BTS4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Gm37179-201ENSMUST00000194862 823 ntBASIC19.46■□□□□ 0.71
Nup54Q8BTS4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nup54Q8BTS4 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nup54Q8BTS4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms