Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Suds3Q8BR65 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Suds3Q8BR65 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Suds3Q8BR65 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Suds3Q8BR65 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.44■□□□□ 0.7
Suds3Q8BR65 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Suds3Q8BR65 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.43■□□□□ 0.7
Suds3Q8BR65 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Suds3Q8BR65 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.42■□□□□ 0.7
Suds3Q8BR65 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Suds3Q8BR65 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.41■□□□□ 0.7
Suds3Q8BR65 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Suds3Q8BR65 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Suds3Q8BR65 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Suds3Q8BR65 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.41■□□□□ 0.7
Suds3Q8BR65 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Suds3Q8BR65 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Suds3Q8BR65 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Gm43060-201ENSMUST00000200621 289 ntBASIC19.39■□□□□ 0.69
Suds3Q8BR65 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Suds3Q8BR65 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Suds3Q8BR65 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
Suds3Q8BR65 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Suds3Q8BR65 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Suds3Q8BR65 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Suds3Q8BR65 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Suds3Q8BR65 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms