Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trpa1Q8BLA8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Gm10493-201ENSMUST00000097270 612 ntBASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.93■□□□□ 0.78
Trpa1Q8BLA8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Gm8495-201ENSMUST00000188740 694 ntBASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trpa1Q8BLA8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trpa1Q8BLA8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trpa1Q8BLA8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trpa1Q8BLA8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.91■□□□□ 0.78
Trpa1Q8BLA8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trpa1Q8BLA8 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trpa1Q8BLA8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trpa1Q8BLA8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Gm9988-201ENSMUST00000069786 435 ntBASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trpa1Q8BLA8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Trpa1Q8BLA8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trpa1Q8BLA8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trpa1Q8BLA8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trpa1Q8BLA8 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.88■□□□□ 0.77
Trpa1Q8BLA8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trpa1Q8BLA8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trpa1Q8BLA8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trpa1Q8BLA8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trpa1Q8BLA8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.85■□□□□ 0.77
Trpa1Q8BLA8 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trpa1Q8BLA8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.85■□□□□ 0.77
Trpa1Q8BLA8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Trpa1Q8BLA8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.85■□□□□ 0.77
Trpa1Q8BLA8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.85■□□□□ 0.77
Trpa1Q8BLA8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms