Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdh20Q8BIZ0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdh20Q8BIZ0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdh20Q8BIZ0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdh20Q8BIZ0 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Pcdh20Q8BIZ0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Gm26833-201ENSMUST00000180899 440 ntBASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdh20Q8BIZ0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdh20Q8BIZ0 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pcdh20Q8BIZ0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms