Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynbQ8BI41 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynbQ8BI41 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SynbQ8BI41 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.06■□□□□ 0.48
SynbQ8BI41 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.06■□□□□ 0.48
SynbQ8BI41 Mir5133-201ENSMUST00000174955 77 ntBASIC18.06■□□□□ 0.48
SynbQ8BI41 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SynbQ8BI41 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SynbQ8BI41 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SynbQ8BI41 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SynbQ8BI41 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.05■□□□□ 0.48
SynbQ8BI41 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.05■□□□□ 0.48
SynbQ8BI41 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.05■□□□□ 0.48
SynbQ8BI41 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SynbQ8BI41 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SynbQ8BI41 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SynbQ8BI41 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
SynbQ8BI41 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
SynbQ8BI41 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.04■□□□□ 0.48
SynbQ8BI41 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.04■□□□□ 0.48
SynbQ8BI41 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.04■□□□□ 0.48
SynbQ8BI41 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SynbQ8BI41 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SynbQ8BI41 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynbQ8BI41 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynbQ8BI41 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.03■□□□□ 0.48
SynbQ8BI41 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SynbQ8BI41 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.03■□□□□ 0.48
SynbQ8BI41 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SynbQ8BI41 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SynbQ8BI41 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynbQ8BI41 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SynbQ8BI41 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SynbQ8BI41 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.02■□□□□ 0.48
SynbQ8BI41 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 Nespas-201ENSMUST00000143738 1083 ntBASIC18.02■□□□□ 0.48
SynbQ8BI41 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SynbQ8BI41 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.02■□□□□ 0.47
SynbQ8BI41 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SynbQ8BI41 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
SynbQ8BI41 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SynbQ8BI41 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynbQ8BI41 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynbQ8BI41 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.01■□□□□ 0.47
SynbQ8BI41 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynbQ8BI41 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.01■□□□□ 0.47
SynbQ8BI41 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.01■□□□□ 0.47
SynbQ8BI41 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
SynbQ8BI41 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SynbQ8BI41 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SynbQ8BI41 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynbQ8BI41 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SynbQ8BI41 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
SynbQ8BI41 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
SynbQ8BI41 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SynbQ8BI41 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18■□□□□ 0.47
SynbQ8BI41 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SynbQ8BI41 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SynbQ8BI41 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
SynbQ8BI41 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18■□□□□ 0.47
SynbQ8BI41 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18■□□□□ 0.47
SynbQ8BI41 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.99■□□□□ 0.47
SynbQ8BI41 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SynbQ8BI41 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SynbQ8BI41 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms