Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Lrrtm4Q80XG9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Gm37179-201ENSMUST00000194862 823 ntBASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Lrrtm4Q80XG9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Lrrtm4Q80XG9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Lrrtm4Q80XG9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Lrrtm4Q80XG9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Lrrtm4Q80XG9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Lrrtm4Q80XG9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lrrtm4Q80XG9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrrtm4Q80XG9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrrtm4Q80XG9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrrtm4Q80XG9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Lrrtm4Q80XG9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms