Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ush1gQ80T11 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ush1gQ80T11 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Ush1gQ80T11 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.86■□□□□ 0.93
Ush1gQ80T11 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.86■□□□□ 0.93
Ush1gQ80T11 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ush1gQ80T11 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
Ush1gQ80T11 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ush1gQ80T11 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ush1gQ80T11 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ush1gQ80T11 Gm12527-201ENSMUST00000117967 564 ntBASIC20.85■□□□□ 0.93
Ush1gQ80T11 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ush1gQ80T11 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ush1gQ80T11 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ush1gQ80T11 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
Ush1gQ80T11 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.84■□□□□ 0.93
Ush1gQ80T11 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ush1gQ80T11 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Gm13148-201ENSMUST00000118892 745 ntBASIC20.83■□□□□ 0.93
Ush1gQ80T11 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.83■□□□□ 0.93
Ush1gQ80T11 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.83■□□□□ 0.93
Ush1gQ80T11 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Ush1gQ80T11 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ush1gQ80T11 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ush1gQ80T11 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ush1gQ80T11 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ush1gQ80T11 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ush1gQ80T11 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ush1gQ80T11 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.82■□□□□ 0.92
Ush1gQ80T11 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ush1gQ80T11 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ush1gQ80T11 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ush1gQ80T11 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ush1gQ80T11 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Ush1gQ80T11 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ush1gQ80T11 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.8■□□□□ 0.92
Ush1gQ80T11 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ush1gQ80T11 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Ush1gQ80T11 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Gm38205-201ENSMUST00000192243 258 ntBASIC20.79■□□□□ 0.92
Ush1gQ80T11 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ush1gQ80T11 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.78■□□□□ 0.92
Ush1gQ80T11 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Gm13168-201ENSMUST00000121771 632 ntBASIC20.78■□□□□ 0.92
Ush1gQ80T11 Gm6420-201ENSMUST00000193885 723 ntBASIC20.78■□□□□ 0.92
Ush1gQ80T11 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ush1gQ80T11 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ush1gQ80T11 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Ush1gQ80T11 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ush1gQ80T11 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms