Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VclQ64727 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VclQ64727 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VclQ64727 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
VclQ64727 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.7■□□□□ 0.58
VclQ64727 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VclQ64727 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VclQ64727 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VclQ64727 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.7■□□□□ 0.58
VclQ64727 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VclQ64727 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VclQ64727 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VclQ64727 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VclQ64727 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.69■□□□□ 0.58
VclQ64727 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.69■□□□□ 0.58
VclQ64727 Gm10033-202ENSMUST00000211874 928 ntBASIC18.69■□□□□ 0.58
VclQ64727 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VclQ64727 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VclQ64727 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
VclQ64727 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
VclQ64727 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 AV356131-201ENSMUST00000206201 750 ntBASIC18.68■□□□□ 0.58
VclQ64727 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.68■□□□□ 0.58
VclQ64727 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VclQ64727 Iqck-206ENSMUST00000208658 2891 ntBASIC18.67■□□□□ 0.58
VclQ64727 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.67■□□□□ 0.58
VclQ64727 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.67■□□□□ 0.58
VclQ64727 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VclQ64727 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.67■□□□□ 0.58
VclQ64727 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.67■□□□□ 0.58
VclQ64727 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.67■□□□□ 0.58
VclQ64727 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VclQ64727 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.67■□□□□ 0.58
VclQ64727 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VclQ64727 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VclQ64727 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VclQ64727 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.66■□□□□ 0.58
VclQ64727 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VclQ64727 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VclQ64727 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VclQ64727 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VclQ64727 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.65■□□□□ 0.58
VclQ64727 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
VclQ64727 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
VclQ64727 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.65■□□□□ 0.58
VclQ64727 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.65■□□□□ 0.58
VclQ64727 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
VclQ64727 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
VclQ64727 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
VclQ64727 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
VclQ64727 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
VclQ64727 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.64■□□□□ 0.57
VclQ64727 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.64■□□□□ 0.57
VclQ64727 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.64■□□□□ 0.57
VclQ64727 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
VclQ64727 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
VclQ64727 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VclQ64727 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VclQ64727 Gm10849-201ENSMUST00000100397 618 ntBASIC18.63■□□□□ 0.57
VclQ64727 Gm7860-201ENSMUST00000121190 879 ntBASIC18.63■□□□□ 0.57
VclQ64727 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
VclQ64727 Gm26571-201ENSMUST00000181399 666 ntBASIC18.63■□□□□ 0.57
VclQ64727 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.63■□□□□ 0.57
VclQ64727 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.63■□□□□ 0.57
VclQ64727 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VclQ64727 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VclQ64727 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VclQ64727 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VclQ64727 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
VclQ64727 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms