Protein–RNA interactions for Protein: Q64287

Irf4, Interferon regulatory factor 4, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf4Q64287 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf4Q64287 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf4Q64287 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Irf4Q64287 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Irf4Q64287 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Irf4Q64287 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Irf4Q64287 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Irf4Q64287 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Irf4Q64287 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Irf4Q64287 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.69■□□□□ 0.58
Irf4Q64287 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Irf4Q64287 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Irf4Q64287 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Mir5133-201ENSMUST00000174955 77 ntBASIC18.68■□□□□ 0.58
Irf4Q64287 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.68■□□□□ 0.58
Irf4Q64287 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.68■□□□□ 0.58
Irf4Q64287 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Irf4Q64287 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf4Q64287 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Irf4Q64287 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.67■□□□□ 0.58
Irf4Q64287 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.67■□□□□ 0.58
Irf4Q64287 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.67■□□□□ 0.58
Irf4Q64287 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.67■□□□□ 0.58
Irf4Q64287 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf4Q64287 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Irf4Q64287 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Irf4Q64287 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Irf4Q64287 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Irf4Q64287 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.66■□□□□ 0.58
Irf4Q64287 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.66■□□□□ 0.58
Irf4Q64287 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf4Q64287 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Irf4Q64287 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Irf4Q64287 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.65■□□□□ 0.58
Irf4Q64287 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Gm6365-201ENSMUST00000054711 744 ntBASIC18.65■□□□□ 0.58
Irf4Q64287 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf4Q64287 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms