Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ift88Q61371 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Ift88Q61371 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.04■□□□□ 0.96
Ift88Q61371 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.04■□□□□ 0.96
Ift88Q61371 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.04■□□□□ 0.96
Ift88Q61371 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Ift88Q61371 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Ift88Q61371 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Ift88Q61371 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ift88Q61371 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ift88Q61371 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ift88Q61371 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ift88Q61371 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Ift88Q61371 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Ift88Q61371 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ift88Q61371 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ift88Q61371 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ift88Q61371 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Ift88Q61371 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ift88Q61371 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Ift88Q61371 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Ift88Q61371 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.01■□□□□ 0.95
Ift88Q61371 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ift88Q61371 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ift88Q61371 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ift88Q61371 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ift88Q61371 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Ift88Q61371 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.01■□□□□ 0.95
Ift88Q61371 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ift88Q61371 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
Ift88Q61371 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.01■□□□□ 0.95
Ift88Q61371 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ift88Q61371 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ift88Q61371 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ift88Q61371 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ift88Q61371 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ift88Q61371 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ift88Q61371 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21■□□□□ 0.95
Ift88Q61371 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ift88Q61371 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21■□□□□ 0.95
Ift88Q61371 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Ift88Q61371 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21■□□□□ 0.95
Ift88Q61371 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Ift88Q61371 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Ift88Q61371 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.99■□□□□ 0.95
Ift88Q61371 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.99■□□□□ 0.95
Ift88Q61371 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.99■□□□□ 0.95
Ift88Q61371 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.99■□□□□ 0.95
Ift88Q61371 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Ift88Q61371 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Ift88Q61371 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ift88Q61371 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ift88Q61371 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ift88Q61371 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ift88Q61371 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ift88Q61371 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ift88Q61371 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ift88Q61371 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ift88Q61371 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Ift88Q61371 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Ift88Q61371 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ift88Q61371 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ift88Q61371 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Ift88Q61371 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ift88Q61371 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ift88Q61371 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ift88Q61371 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms