Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ebf1Q07802 Gm38205-201ENSMUST00000192243 258 ntBASIC19.25■□□□□ 0.67
Ebf1Q07802 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ebf1Q07802 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ebf1Q07802 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ebf1Q07802 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ebf1Q07802 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Ebf1Q07802 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.24■□□□□ 0.67
Ebf1Q07802 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.24■□□□□ 0.67
Ebf1Q07802 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ebf1Q07802 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.24■□□□□ 0.67
Ebf1Q07802 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.24■□□□□ 0.67
Ebf1Q07802 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ebf1Q07802 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ebf1Q07802 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ebf1Q07802 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 Gm13534-201ENSMUST00000121169 513 ntBASIC19.23■□□□□ 0.67
Ebf1Q07802 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.23■□□□□ 0.67
Ebf1Q07802 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.23■□□□□ 0.67
Ebf1Q07802 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ebf1Q07802 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ebf1Q07802 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf1Q07802 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf1Q07802 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.22■□□□□ 0.67
Ebf1Q07802 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf1Q07802 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf1Q07802 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ebf1Q07802 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ebf1Q07802 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Ebf1Q07802 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Gm6420-201ENSMUST00000193885 723 ntBASIC19.21■□□□□ 0.67
Ebf1Q07802 Gm10252-201ENSMUST00000209541 832 ntBASIC19.21■□□□□ 0.67
Ebf1Q07802 Gm20049-201ENSMUST00000219950 730 ntBASIC19.21■□□□□ 0.67
Ebf1Q07802 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ebf1Q07802 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ebf1Q07802 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ebf1Q07802 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Ebf1Q07802 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ebf1Q07802 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ebf1Q07802 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.2■□□□□ 0.66
Ebf1Q07802 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Ebf1Q07802 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ebf1Q07802 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf1Q07802 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf1Q07802 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf1Q07802 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ebf1Q07802 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.19■□□□□ 0.66
Ebf1Q07802 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Ebf1Q07802 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf1Q07802 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ebf1Q07802 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ebf1Q07802 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms