Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 Gm10602-201ENSMUST00000098239 609 ntBASIC20.71■□□□□ 0.91
CiitaP79621 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CiitaP79621 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CiitaP79621 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CiitaP79621 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CiitaP79621 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.7■□□□□ 0.9
CiitaP79621 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CiitaP79621 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CiitaP79621 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CiitaP79621 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CiitaP79621 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
CiitaP79621 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.69■□□□□ 0.9
CiitaP79621 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.69■□□□□ 0.9
CiitaP79621 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
CiitaP79621 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CiitaP79621 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.68■□□□□ 0.9
CiitaP79621 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CiitaP79621 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.67■□□□□ 0.9
CiitaP79621 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CiitaP79621 Gm7290-201ENSMUST00000104990 617 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Gm13148-201ENSMUST00000118892 745 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Gm12918-201ENSMUST00000120234 636 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Gm15710-201ENSMUST00000121821 636 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Mir5133-201ENSMUST00000174955 77 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Gm5075-201ENSMUST00000196916 622 ntBASIC20.67■□□□□ 0.9
CiitaP79621 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CiitaP79621 Gm6365-201ENSMUST00000054711 744 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CiitaP79621 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CiitaP79621 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CiitaP79621 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.67■□□□□ 0.9
CiitaP79621 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.67■□□□□ 0.9
CiitaP79621 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CiitaP79621 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CiitaP79621 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.67■□□□□ 0.9
CiitaP79621 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CiitaP79621 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CiitaP79621 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.66■□□□□ 0.9
CiitaP79621 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.66■□□□□ 0.9
CiitaP79621 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.66■□□□□ 0.9
CiitaP79621 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CiitaP79621 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CiitaP79621 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CiitaP79621 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CiitaP79621 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CiitaP79621 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CiitaP79621 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CiitaP79621 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CiitaP79621 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CiitaP79621 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CiitaP79621 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CiitaP79621 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CiitaP79621 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.65■□□□□ 0.9
CiitaP79621 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CiitaP79621 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CiitaP79621 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CiitaP79621 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.64■□□□□ 0.89
CiitaP79621 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
CiitaP79621 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CiitaP79621 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CiitaP79621 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CiitaP79621 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CiitaP79621 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CiitaP79621 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CiitaP79621 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CiitaP79621 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CiitaP79621 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CiitaP79621 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CiitaP79621 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CiitaP79621 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CiitaP79621 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms