Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.57■□□□□ 0.72
Msx3P70354 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Msx3P70354 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msx3P70354 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Msx3P70354 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Msx3P70354 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Gm26833-201ENSMUST00000180899 440 ntBASIC19.56■□□□□ 0.72
Msx3P70354 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Msx3P70354 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Msx3P70354 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Msx3P70354 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Msx3P70354 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Msx3P70354 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.55■□□□□ 0.72
Msx3P70354 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Msx3P70354 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Msx3P70354 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.55■□□□□ 0.72
Msx3P70354 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Msx3P70354 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.54■□□□□ 0.72
Msx3P70354 BC021767-201ENSMUST00000126387 1716 ntBASIC19.54■□□□□ 0.72
Msx3P70354 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msx3P70354 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Msx3P70354 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Msx3P70354 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msx3P70354 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msx3P70354 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.54■□□□□ 0.72
Msx3P70354 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msx3P70354 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Msx3P70354 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Msx3P70354 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.53■□□□□ 0.72
Msx3P70354 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msx3P70354 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
Msx3P70354 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.53■□□□□ 0.72
Msx3P70354 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msx3P70354 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msx3P70354 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.53■□□□□ 0.72
Msx3P70354 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msx3P70354 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Msx3P70354 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msx3P70354 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Msx3P70354 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Msx3P70354 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Msx3P70354 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.52■□□□□ 0.72
Msx3P70354 Gm7860-201ENSMUST00000121190 879 ntBASIC19.52■□□□□ 0.72
Msx3P70354 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.52■□□□□ 0.72
Msx3P70354 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Msx3P70354 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Msx3P70354 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msx3P70354 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Msx3P70354 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msx3P70354 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msx3P70354 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msx3P70354 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msx3P70354 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.51■□□□□ 0.71
Msx3P70354 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msx3P70354 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Msx3P70354 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.5■□□□□ 0.71
Msx3P70354 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Msx3P70354 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 Gm43017-201ENSMUST00000198296 752 ntBASIC19.5■□□□□ 0.71
Msx3P70354 Gm40848-201ENSMUST00000221998 324 ntBASIC19.5■□□□□ 0.71
Msx3P70354 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Msx3P70354 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Msx3P70354 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.49■□□□□ 0.71
Msx3P70354 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms