Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx1P63006 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.72■□□□□ 0.59
Lhx1P63006 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx1P63006 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx1P63006 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx1P63006 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lhx1P63006 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Lhx1P63006 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Lhx1P63006 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx1P63006 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.71■□□□□ 0.59
Lhx1P63006 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx1P63006 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx1P63006 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx1P63006 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx1P63006 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Lhx1P63006 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Lhx1P63006 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lhx1P63006 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Lhx1P63006 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Gm6420-201ENSMUST00000193885 723 ntBASIC18.7■□□□□ 0.58
Lhx1P63006 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.7■□□□□ 0.58
Lhx1P63006 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lhx1P63006 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lhx1P63006 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lhx1P63006 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.69■□□□□ 0.58
Lhx1P63006 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Lhx1P63006 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lhx1P63006 Gm10602-201ENSMUST00000098239 609 ntBASIC18.69■□□□□ 0.58
Lhx1P63006 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lhx1P63006 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Lhx1P63006 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lhx1P63006 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.68■□□□□ 0.58
Lhx1P63006 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.68■□□□□ 0.58
Lhx1P63006 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Lhx1P63006 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.68■□□□□ 0.58
Lhx1P63006 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lhx1P63006 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lhx1P63006 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx1P63006 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx1P63006 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Lhx1P63006 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx1P63006 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx1P63006 Gm7290-201ENSMUST00000104990 617 ntBASIC18.67■□□□□ 0.58
Lhx1P63006 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.67■□□□□ 0.58
Lhx1P63006 Gm12918-201ENSMUST00000120234 636 ntBASIC18.67■□□□□ 0.58
Lhx1P63006 Gm15710-201ENSMUST00000121821 636 ntBASIC18.67■□□□□ 0.58
Lhx1P63006 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lhx1P63006 Gm5075-201ENSMUST00000196916 622 ntBASIC18.67■□□□□ 0.58
Lhx1P63006 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx1P63006 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Lhx1P63006 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.67■□□□□ 0.58
Lhx1P63006 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.67■□□□□ 0.58
Lhx1P63006 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx1P63006 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lhx1P63006 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx1P63006 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.66■□□□□ 0.58
Lhx1P63006 Nespas-201ENSMUST00000143738 1083 ntBASIC18.66■□□□□ 0.58
Lhx1P63006 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.66■□□□□ 0.58
Lhx1P63006 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.66■□□□□ 0.58
Lhx1P63006 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lhx1P63006 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms