Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ybx1P62960 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ybx1P62960 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.6■□□□□ 0.73
Ybx1P62960 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.6■□□□□ 0.73
Ybx1P62960 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ybx1P62960 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
Ybx1P62960 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ybx1P62960 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ybx1P62960 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ybx1P62960 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ybx1P62960 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ybx1P62960 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ybx1P62960 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.59■□□□□ 0.73
Ybx1P62960 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ybx1P62960 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.59■□□□□ 0.73
Ybx1P62960 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.59■□□□□ 0.73
Ybx1P62960 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ybx1P62960 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ybx1P62960 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ybx1P62960 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ybx1P62960 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ybx1P62960 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ybx1P62960 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ybx1P62960 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.58■□□□□ 0.73
Ybx1P62960 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ybx1P62960 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.58■□□□□ 0.72
Ybx1P62960 Gm26524-201ENSMUST00000192339 390 ntBASIC19.58■□□□□ 0.72
Ybx1P62960 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ybx1P62960 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ybx1P62960 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ybx1P62960 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ybx1P62960 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ybx1P62960 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.57■□□□□ 0.72
Ybx1P62960 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ybx1P62960 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ybx1P62960 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ybx1P62960 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ybx1P62960 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ybx1P62960 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.57■□□□□ 0.72
Ybx1P62960 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.57■□□□□ 0.72
Ybx1P62960 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.57■□□□□ 0.72
Ybx1P62960 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ybx1P62960 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.57■□□□□ 0.72
Ybx1P62960 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ybx1P62960 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ybx1P62960 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ybx1P62960 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.57■□□□□ 0.72
Ybx1P62960 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ybx1P62960 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.56■□□□□ 0.72
Ybx1P62960 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.56■□□□□ 0.72
Ybx1P62960 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ybx1P62960 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Ybx1P62960 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ybx1P62960 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ybx1P62960 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.56■□□□□ 0.72
Ybx1P62960 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ybx1P62960 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.56■□□□□ 0.72
Ybx1P62960 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ybx1P62960 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.55■□□□□ 0.72
Ybx1P62960 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.55■□□□□ 0.72
Ybx1P62960 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.55■□□□□ 0.72
Ybx1P62960 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ybx1P62960 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.55■□□□□ 0.72
Ybx1P62960 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ybx1P62960 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ybx1P62960 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ybx1P62960 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Trmt13-210ENSMUST00000198454 880 ntBASIC19.54■□□□□ 0.72
Ybx1P62960 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ybx1P62960 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ybx1P62960 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ybx1P62960 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
Ybx1P62960 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.53■□□□□ 0.72
Ybx1P62960 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ybx1P62960 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ybx1P62960 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ybx1P62960 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ybx1P62960 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ybx1P62960 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms