Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.45■□□□□ 0.86
Nub1P54729 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Nub1P54729 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nub1P54729 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.45■□□□□ 0.86
Nub1P54729 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.45■□□□□ 0.86
Nub1P54729 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nub1P54729 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.45■□□□□ 0.86
Nub1P54729 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.45■□□□□ 0.86
Nub1P54729 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nub1P54729 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nub1P54729 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nub1P54729 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.43■□□□□ 0.86
Nub1P54729 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Nub1P54729 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nub1P54729 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.43■□□□□ 0.86
Nub1P54729 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Nub1P54729 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 Iqck-206ENSMUST00000208658 2891 ntBASIC20.43■□□□□ 0.86
Nub1P54729 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Nub1P54729 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nub1P54729 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Nub1P54729 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Nub1P54729 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.42■□□□□ 0.86
Nub1P54729 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Nub1P54729 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Nub1P54729 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nub1P54729 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nub1P54729 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nub1P54729 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nub1P54729 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nub1P54729 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nub1P54729 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nub1P54729 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Nub1P54729 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.41■□□□□ 0.86
Nub1P54729 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nub1P54729 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Nub1P54729 Gm10493-201ENSMUST00000097270 612 ntBASIC20.41■□□□□ 0.86
Nub1P54729 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nub1P54729 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.41■□□□□ 0.86
Nub1P54729 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nub1P54729 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Nub1P54729 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Nub1P54729 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.4■□□□□ 0.86
Nub1P54729 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Gm9988-201ENSMUST00000069786 435 ntBASIC20.4■□□□□ 0.86
Nub1P54729 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Nub1P54729 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nub1P54729 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nub1P54729 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nub1P54729 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nub1P54729 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Nub1P54729 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nub1P54729 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nub1P54729 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nub1P54729 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
Nub1P54729 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.39■□□□□ 0.85
Nub1P54729 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nub1P54729 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nub1P54729 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nub1P54729 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nub1P54729 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nub1P54729 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nub1P54729 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.38■□□□□ 0.85
Nub1P54729 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Nub1P54729 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.38■□□□□ 0.85
Nub1P54729 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nub1P54729 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nub1P54729 Gm7860-201ENSMUST00000121190 879 ntBASIC20.38■□□□□ 0.85
Nub1P54729 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nub1P54729 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nub1P54729 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nub1P54729 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nub1P54729 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Nub1P54729 Reep4-203ENSMUST00000226563 1444 ntBASIC20.37■□□□□ 0.85
Nub1P54729 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Nub1P54729 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms