Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GdnfP48540 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GdnfP48540 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GdnfP48540 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GdnfP48540 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.59■□□□□ 0.25
GdnfP48540 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
GdnfP48540 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GdnfP48540 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GdnfP48540 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.59■□□□□ 0.25
GdnfP48540 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GdnfP48540 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.59■□□□□ 0.25
GdnfP48540 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GdnfP48540 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GdnfP48540 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GdnfP48540 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
GdnfP48540 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
GdnfP48540 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.58■□□□□ 0.24
GdnfP48540 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.58■□□□□ 0.24
GdnfP48540 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GdnfP48540 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.57■□□□□ 0.24
GdnfP48540 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.57■□□□□ 0.24
GdnfP48540 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.57■□□□□ 0.24
GdnfP48540 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.57■□□□□ 0.24
GdnfP48540 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
GdnfP48540 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.57■□□□□ 0.24
GdnfP48540 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.57■□□□□ 0.24
GdnfP48540 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
GdnfP48540 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
GdnfP48540 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 BC021767-201ENSMUST00000126387 1716 ntBASIC16.56■□□□□ 0.24
GdnfP48540 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
GdnfP48540 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
GdnfP48540 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.56■□□□□ 0.24
GdnfP48540 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.56■□□□□ 0.24
GdnfP48540 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
GdnfP48540 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GdnfP48540 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
GdnfP48540 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
GdnfP48540 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
GdnfP48540 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.55■□□□□ 0.24
GdnfP48540 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GdnfP48540 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
GdnfP48540 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
GdnfP48540 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
GdnfP48540 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.55■□□□□ 0.24
GdnfP48540 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.54■□□□□ 0.24
GdnfP48540 Mir6236-201ENSMUST00000184437 123 ntBASIC16.54■□□□□ 0.24
GdnfP48540 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
GdnfP48540 Gm13241-201ENSMUST00000094493 780 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms