Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pbx1P41778 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pbx1P41778 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pbx1P41778 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pbx1P41778 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.62■□□□□ 0.89
Pbx1P41778 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pbx1P41778 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pbx1P41778 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pbx1P41778 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pbx1P41778 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.61■□□□□ 0.89
Pbx1P41778 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.61■□□□□ 0.89
Pbx1P41778 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.61■□□□□ 0.89
Pbx1P41778 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Gm12251-201ENSMUST00000117893 792 ntBASIC20.61■□□□□ 0.89
Pbx1P41778 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pbx1P41778 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.6■□□□□ 0.89
Pbx1P41778 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 Rarb-207ENSMUST00000225921 2756 ntBASIC20.6■□□□□ 0.89
Pbx1P41778 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pbx1P41778 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.6■□□□□ 0.89
Pbx1P41778 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pbx1P41778 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pbx1P41778 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.59■□□□□ 0.89
Pbx1P41778 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Pbx1P41778 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.59■□□□□ 0.89
Pbx1P41778 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pbx1P41778 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.59■□□□□ 0.89
Pbx1P41778 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pbx1P41778 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pbx1P41778 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.59■□□□□ 0.89
Pbx1P41778 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.59■□□□□ 0.89
Pbx1P41778 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pbx1P41778 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pbx1P41778 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Pbx1P41778 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pbx1P41778 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.58■□□□□ 0.89
Pbx1P41778 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pbx1P41778 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pbx1P41778 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pbx1P41778 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pbx1P41778 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pbx1P41778 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pbx1P41778 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.57■□□□□ 0.88
Pbx1P41778 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.57■□□□□ 0.88
Pbx1P41778 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pbx1P41778 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.56■□□□□ 0.88
Pbx1P41778 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.56■□□□□ 0.88
Pbx1P41778 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pbx1P41778 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pbx1P41778 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pbx1P41778 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.55■□□□□ 0.88
Pbx1P41778 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.55■□□□□ 0.88
Pbx1P41778 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pbx1P41778 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pbx1P41778 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pbx1P41778 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pbx1P41778 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pbx1P41778 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pbx1P41778 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.54■□□□□ 0.88
Pbx1P41778 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pbx1P41778 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pbx1P41778 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms