Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cxcl12P40224 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cxcl12P40224 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cxcl12P40224 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cxcl12P40224 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.77■□□□□ 0.76
Cxcl12P40224 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cxcl12P40224 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.77■□□□□ 0.76
Cxcl12P40224 Gm6433-201ENSMUST00000118634 875 ntBASIC19.77■□□□□ 0.76
Cxcl12P40224 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.77■□□□□ 0.76
Cxcl12P40224 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cxcl12P40224 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cxcl12P40224 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cxcl12P40224 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.77■□□□□ 0.76
Cxcl12P40224 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cxcl12P40224 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.77■□□□□ 0.75
Cxcl12P40224 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cxcl12P40224 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl12P40224 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl12P40224 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.76■□□□□ 0.75
Cxcl12P40224 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Cxcl12P40224 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.76■□□□□ 0.75
Cxcl12P40224 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.76■□□□□ 0.75
Cxcl12P40224 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.76■□□□□ 0.75
Cxcl12P40224 Gm43799-201ENSMUST00000201845 579 ntBASIC19.76■□□□□ 0.75
Cxcl12P40224 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cxcl12P40224 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl12P40224 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl12P40224 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl12P40224 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cxcl12P40224 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.76■□□□□ 0.75
Cxcl12P40224 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cxcl12P40224 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Gm10231-201ENSMUST00000181584 441 ntBASIC19.75■□□□□ 0.75
Cxcl12P40224 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Cxcl12P40224 Gm10175-202ENSMUST00000208752 441 ntBASIC19.75■□□□□ 0.75
Cxcl12P40224 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cxcl12P40224 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cxcl12P40224 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cxcl12P40224 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cxcl12P40224 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cxcl12P40224 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.74■□□□□ 0.75
Cxcl12P40224 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cxcl12P40224 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cxcl12P40224 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cxcl12P40224 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Cxcl12P40224 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Cxcl12P40224 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Cxcl12P40224 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cxcl12P40224 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
Cxcl12P40224 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cxcl12P40224 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Cxcl12P40224 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cxcl12P40224 Mir5122-201ENSMUST00000175004 89 ntBASIC19.72■□□□□ 0.75
Cxcl12P40224 Gm5417-201ENSMUST00000079706 384 ntBASIC19.72■□□□□ 0.75
Cxcl12P40224 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cxcl12P40224 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cxcl12P40224 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cxcl12P40224 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cxcl12P40224 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cxcl12P40224 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
Cxcl12P40224 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.71■□□□□ 0.75
Cxcl12P40224 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Cxcl12P40224 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cxcl12P40224 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.7■□□□□ 0.74
Cxcl12P40224 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cxcl12P40224 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Cxcl12P40224 Gm21362-201ENSMUST00000194272 928 ntBASIC19.7■□□□□ 0.74
Cxcl12P40224 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.7■□□□□ 0.74
Cxcl12P40224 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cxcl12P40224 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cxcl12P40224 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms