Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.67■□□□□ 0.42
BgnP28653 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.67■□□□□ 0.42
BgnP28653 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.67■□□□□ 0.42
BgnP28653 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.67■□□□□ 0.42
BgnP28653 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BgnP28653 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.66■□□□□ 0.42
BgnP28653 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.66■□□□□ 0.42
BgnP28653 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
BgnP28653 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BgnP28653 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.66■□□□□ 0.42
BgnP28653 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BgnP28653 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BgnP28653 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
BgnP28653 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BgnP28653 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.65■□□□□ 0.42
BgnP28653 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BgnP28653 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
BgnP28653 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BgnP28653 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BgnP28653 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BgnP28653 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
BgnP28653 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BgnP28653 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BgnP28653 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BgnP28653 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.64■□□□□ 0.41
BgnP28653 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BgnP28653 Gm43530-201ENSMUST00000195920 274 ntBASIC17.64■□□□□ 0.41
BgnP28653 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.64■□□□□ 0.41
BgnP28653 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BgnP28653 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BgnP28653 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BgnP28653 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Gm13238-201ENSMUST00000117655 780 ntBASIC17.63■□□□□ 0.41
BgnP28653 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.63■□□□□ 0.41
BgnP28653 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.63■□□□□ 0.41
BgnP28653 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BgnP28653 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BgnP28653 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BgnP28653 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BgnP28653 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BgnP28653 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BgnP28653 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
BgnP28653 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.62■□□□□ 0.41
BgnP28653 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BgnP28653 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BgnP28653 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BgnP28653 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.62■□□□□ 0.41
BgnP28653 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
BgnP28653 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BgnP28653 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
BgnP28653 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
BgnP28653 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BgnP28653 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
BgnP28653 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
BgnP28653 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BgnP28653 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BgnP28653 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BgnP28653 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BgnP28653 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
BgnP28653 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BgnP28653 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms