Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
Cd40P27512 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cd40P27512 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cd40P27512 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.25■□□□□ 0.35
Cd40P27512 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cd40P27512 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.25■□□□□ 0.35
Cd40P27512 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cd40P27512 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd40P27512 Reep4-203ENSMUST00000226563 1444 ntBASIC17.24■□□□□ 0.35
Cd40P27512 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd40P27512 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Cd40P27512 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd40P27512 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd40P27512 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Cd40P27512 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.24■□□□□ 0.35
Cd40P27512 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.24■□□□□ 0.35
Cd40P27512 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.24■□□□□ 0.35
Cd40P27512 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd40P27512 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cd40P27512 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.24■□□□□ 0.35
Cd40P27512 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cd40P27512 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Cd40P27512 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cd40P27512 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.23■□□□□ 0.35
Cd40P27512 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Cd40P27512 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cd40P27512 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cd40P27512 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Gm13234-201ENSMUST00000120010 747 ntBASIC17.22■□□□□ 0.35
Cd40P27512 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.22■□□□□ 0.35
Cd40P27512 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cd40P27512 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cd40P27512 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Cd40P27512 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cd40P27512 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd40P27512 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd40P27512 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd40P27512 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.21■□□□□ 0.35
Cd40P27512 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd40P27512 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
Cd40P27512 Gm42778-201ENSMUST00000199644 553 ntBASIC17.21■□□□□ 0.35
Cd40P27512 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.21■□□□□ 0.35
Cd40P27512 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.21■□□□□ 0.35
Cd40P27512 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cd40P27512 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cd40P27512 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.2■□□□□ 0.34
Cd40P27512 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.2■□□□□ 0.34
Cd40P27512 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.2■□□□□ 0.34
Cd40P27512 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cd40P27512 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cd40P27512 Gm13146-201ENSMUST00000118508 780 ntBASIC17.19■□□□□ 0.34
Cd40P27512 Gm18284-201ENSMUST00000172604 624 ntBASIC17.19■□□□□ 0.34
Cd40P27512 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd40P27512 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd40P27512 Gm5874-201ENSMUST00000096101 508 ntBASIC17.19■□□□□ 0.34
Cd40P27512 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd40P27512 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Cd40P27512 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.19■□□□□ 0.34
Cd40P27512 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd40P27512 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd40P27512 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.19■□□□□ 0.34
Cd40P27512 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.19■□□□□ 0.34
Cd40P27512 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cd40P27512 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cd40P27512 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cd40P27512 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms