Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18■□□□□ 0.47
Matn4O89029 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.99■□□□□ 0.47
Matn4O89029 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Matn4O89029 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Matn4O89029 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn4O89029 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Matn4O89029 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.98■□□□□ 0.47
Matn4O89029 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn4O89029 Grk6-206ENSMUST00000224995 2971 ntBASIC17.98■□□□□ 0.47
Matn4O89029 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn4O89029 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.98■□□□□ 0.47
Matn4O89029 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn4O89029 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Matn4O89029 Gm45102-201ENSMUST00000207427 857 ntBASIC17.98■□□□□ 0.47
Matn4O89029 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.98■□□□□ 0.47
Matn4O89029 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Matn4O89029 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.98■□□□□ 0.47
Matn4O89029 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Matn4O89029 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.98■□□□□ 0.47
Matn4O89029 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
Matn4O89029 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn4O89029 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn4O89029 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn4O89029 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn4O89029 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Matn4O89029 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Matn4O89029 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Matn4O89029 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn4O89029 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn4O89029 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn4O89029 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.96■□□□□ 0.47
Matn4O89029 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.96■□□□□ 0.47
Matn4O89029 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.96■□□□□ 0.47
Matn4O89029 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.96■□□□□ 0.47
Matn4O89029 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn4O89029 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Matn4O89029 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Matn4O89029 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Matn4O89029 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.95■□□□□ 0.46
Matn4O89029 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Gm12922-201ENSMUST00000120626 809 ntBASIC17.95■□□□□ 0.46
Matn4O89029 Gm14117-201ENSMUST00000122417 843 ntBASIC17.95■□□□□ 0.46
Matn4O89029 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.95■□□□□ 0.46
Matn4O89029 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Matn4O89029 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.95■□□□□ 0.46
Matn4O89029 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Matn4O89029 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Matn4O89029 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.94■□□□□ 0.46
Matn4O89029 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.94■□□□□ 0.46
Matn4O89029 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.94■□□□□ 0.46
Matn4O89029 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Matn4O89029 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Matn4O89029 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.94■□□□□ 0.46
Matn4O89029 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Matn4O89029 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.94■□□□□ 0.46
Matn4O89029 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn4O89029 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn4O89029 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Matn4O89029 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn4O89029 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn4O89029 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Matn4O89029 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Matn4O89029 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms