Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cops3O88543 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17■□□□□ 0.31
Cops3O88543 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cops3O88543 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cops3O88543 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cops3O88543 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cops3O88543 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cops3O88543 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cops3O88543 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cops3O88543 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cops3O88543 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.99■□□□□ 0.31
Cops3O88543 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.99■□□□□ 0.31
Cops3O88543 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cops3O88543 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.99■□□□□ 0.31
Cops3O88543 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cops3O88543 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cops3O88543 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cops3O88543 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cops3O88543 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cops3O88543 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.98■□□□□ 0.31
Cops3O88543 Rps24-207ENSMUST00000224568 714 ntBASIC16.98■□□□□ 0.31
Cops3O88543 Golgb1-201ENSMUST00000023534 498 ntBASIC16.98■□□□□ 0.31
Cops3O88543 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cops3O88543 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cops3O88543 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cops3O88543 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cops3O88543 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cops3O88543 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.97■□□□□ 0.31
Cops3O88543 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Cops3O88543 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cops3O88543 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cops3O88543 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Cops3O88543 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.96■□□□□ 0.31
Cops3O88543 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cops3O88543 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cops3O88543 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cops3O88543 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cops3O88543 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Cops3O88543 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.96■□□□□ 0.3
Cops3O88543 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cops3O88543 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cops3O88543 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.95■□□□□ 0.3
Cops3O88543 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cops3O88543 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.95■□□□□ 0.3
Cops3O88543 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.95■□□□□ 0.3
Cops3O88543 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.95■□□□□ 0.3
Cops3O88543 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.95■□□□□ 0.3
Cops3O88543 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cops3O88543 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cops3O88543 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cops3O88543 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.94■□□□□ 0.3
Cops3O88543 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cops3O88543 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms