Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfbr3O88393 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfbr3O88393 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbr3O88393 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbr3O88393 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbr3O88393 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbr3O88393 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbr3O88393 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbr3O88393 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfbr3O88393 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Gm12896-201ENSMUST00000118430 226 ntBASIC18.15■□□□□ 0.5
Tgfbr3O88393 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.15■□□□□ 0.5
Tgfbr3O88393 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfbr3O88393 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfbr3O88393 Notumos-201ENSMUST00000151998 2659 ntBASIC18.14■□□□□ 0.49
Tgfbr3O88393 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbr3O88393 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbr3O88393 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbr3O88393 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbr3O88393 Mir6982-201ENSMUST00000184354 68 ntBASIC18.13■□□□□ 0.49
Tgfbr3O88393 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbr3O88393 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.13■□□□□ 0.49
Tgfbr3O88393 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbr3O88393 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfbr3O88393 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfbr3O88393 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.11■□□□□ 0.49
Tgfbr3O88393 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.11■□□□□ 0.49
Tgfbr3O88393 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.11■□□□□ 0.49
Tgfbr3O88393 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tgfbr3O88393 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfbr3O88393 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfbr3O88393 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Tgfbr3O88393 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tgfbr3O88393 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tgfbr3O88393 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Tgfbr3O88393 Gm2559-201ENSMUST00000201323 363 ntBASIC18.08■□□□□ 0.48
Tgfbr3O88393 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tgfbr3O88393 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.08■□□□□ 0.48
Tgfbr3O88393 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms