Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ttc3O88196 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Gm20760-201ENSMUST00000179197 648 ntBASIC20.12■□□□□ 0.81
Ttc3O88196 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ttc3O88196 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ttc3O88196 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ttc3O88196 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ttc3O88196 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc3O88196 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc3O88196 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ttc3O88196 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc3O88196 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.11■□□□□ 0.81
Ttc3O88196 Gm37856-201ENSMUST00000191634 999 ntBASIC20.11■□□□□ 0.81
Ttc3O88196 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc3O88196 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ttc3O88196 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc3O88196 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ttc3O88196 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.1■□□□□ 0.81
Ttc3O88196 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Ttc3O88196 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ttc3O88196 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Ttc3O88196 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ttc3O88196 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.09■□□□□ 0.81
Ttc3O88196 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc3O88196 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.09■□□□□ 0.81
Ttc3O88196 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc3O88196 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc3O88196 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc3O88196 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc3O88196 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc3O88196 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ttc3O88196 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Ttc3O88196 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ttc3O88196 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ttc3O88196 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.08■□□□□ 0.81
Ttc3O88196 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.08■□□□□ 0.81
Ttc3O88196 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ttc3O88196 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Ttc3O88196 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ttc3O88196 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ttc3O88196 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.08■□□□□ 0.8
Ttc3O88196 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.08■□□□□ 0.8
Ttc3O88196 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Ttc3O88196 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.08■□□□□ 0.8
Ttc3O88196 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Ttc3O88196 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ttc3O88196 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc3O88196 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc3O88196 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ttc3O88196 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc3O88196 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc3O88196 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.07■□□□□ 0.8
Ttc3O88196 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.07■□□□□ 0.8
Ttc3O88196 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.07■□□□□ 0.8
Ttc3O88196 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.07■□□□□ 0.8
Ttc3O88196 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc3O88196 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.07■□□□□ 0.8
Ttc3O88196 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc3O88196 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ttc3O88196 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.07■□□□□ 0.8
Ttc3O88196 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Ttc3O88196 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.06■□□□□ 0.8
Ttc3O88196 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.06■□□□□ 0.8
Ttc3O88196 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ttc3O88196 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms