Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptch2O35595 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptch2O35595 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptch2O35595 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ptch2O35595 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.53■□□□□ 0.72
Ptch2O35595 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ptch2O35595 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Gm7290-201ENSMUST00000104990 617 ntBASIC19.53■□□□□ 0.72
Ptch2O35595 Gm12918-201ENSMUST00000120234 636 ntBASIC19.53■□□□□ 0.72
Ptch2O35595 Gm15710-201ENSMUST00000121821 636 ntBASIC19.53■□□□□ 0.72
Ptch2O35595 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.53■□□□□ 0.72
Ptch2O35595 Gm5075-201ENSMUST00000196916 622 ntBASIC19.53■□□□□ 0.72
Ptch2O35595 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.53■□□□□ 0.72
Ptch2O35595 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.53■□□□□ 0.72
Ptch2O35595 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.53■□□□□ 0.72
Ptch2O35595 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ptch2O35595 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ptch2O35595 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Ptch2O35595 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptch2O35595 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.52■□□□□ 0.72
Ptch2O35595 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptch2O35595 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptch2O35595 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ptch2O35595 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ptch2O35595 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.51■□□□□ 0.71
Ptch2O35595 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ptch2O35595 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Ptch2O35595 Gm6211-202ENSMUST00000167849 925 ntBASIC19.51■□□□□ 0.71
Ptch2O35595 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptch2O35595 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.51■□□□□ 0.71
Ptch2O35595 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ptch2O35595 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptch2O35595 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptch2O35595 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ptch2O35595 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptch2O35595 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ptch2O35595 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ptch2O35595 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Ptch2O35595 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptch2O35595 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptch2O35595 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptch2O35595 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.5■□□□□ 0.71
Ptch2O35595 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptch2O35595 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.5■□□□□ 0.71
Ptch2O35595 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptch2O35595 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ptch2O35595 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ptch2O35595 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptch2O35595 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ptch2O35595 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ptch2O35595 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.49■□□□□ 0.71
Ptch2O35595 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ptch2O35595 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.49■□□□□ 0.71
Ptch2O35595 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ptch2O35595 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ptch2O35595 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ptch2O35595 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ptch2O35595 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ptch2O35595 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ptch2O35595 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ptch2O35595 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.48■□□□□ 0.71
Ptch2O35595 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.48■□□□□ 0.71
Ptch2O35595 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
Ptch2O35595 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.48■□□□□ 0.71
Ptch2O35595 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ptch2O35595 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ptch2O35595 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.47■□□□□ 0.71
Ptch2O35595 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Ptch2O35595 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ptch2O35595 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptch2O35595 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.46■□□□□ 0.71
Ptch2O35595 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ptch2O35595 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptch2O35595 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ptch2O35595 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Ptch2O35595 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms