Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sh3yl1O08641 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 AA386476-201ENSMUST00000098781 1665 ntBASIC18.08■□□□□ 0.48
Sh3yl1O08641 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sh3yl1O08641 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Rarb-207ENSMUST00000225921 2756 ntBASIC18.07■□□□□ 0.48
Sh3yl1O08641 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Gm5874-201ENSMUST00000096101 508 ntBASIC18.07■□□□□ 0.48
Sh3yl1O08641 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sh3yl1O08641 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.06■□□□□ 0.48
Sh3yl1O08641 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Gm8495-201ENSMUST00000188740 694 ntBASIC18.06■□□□□ 0.48
Sh3yl1O08641 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sh3yl1O08641 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
Sh3yl1O08641 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sh3yl1O08641 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Gm10493-201ENSMUST00000097270 612 ntBASIC18.03■□□□□ 0.48
Sh3yl1O08641 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sh3yl1O08641 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms