Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc188F6WEU2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc188F6WEU2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Ccdc188F6WEU2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc188F6WEU2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc188F6WEU2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc188F6WEU2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc188F6WEU2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc188F6WEU2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc188F6WEU2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccdc188F6WEU2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.49■□□□□ 0.71
Ccdc188F6WEU2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc188F6WEU2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc188F6WEU2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc188F6WEU2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc188F6WEU2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc188F6WEU2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc188F6WEU2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.48■□□□□ 0.71
Ccdc188F6WEU2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc188F6WEU2 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.48■□□□□ 0.71
Ccdc188F6WEU2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc188F6WEU2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc188F6WEU2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc188F6WEU2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Ccdc188F6WEU2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Ccdc188F6WEU2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc188F6WEU2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc188F6WEU2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc188F6WEU2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc188F6WEU2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc188F6WEU2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc188F6WEU2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc188F6WEU2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc188F6WEU2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc188F6WEU2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc188F6WEU2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc188F6WEU2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.44■□□□□ 0.7
Ccdc188F6WEU2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc188F6WEU2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc188F6WEU2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc188F6WEU2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc188F6WEU2 Gm43183-201ENSMUST00000200632 547 ntBASIC19.43■□□□□ 0.7
Ccdc188F6WEU2 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.43■□□□□ 0.7
Ccdc188F6WEU2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc188F6WEU2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc188F6WEU2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc188F6WEU2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc188F6WEU2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Gm18032-201ENSMUST00000222541 538 ntBASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc188F6WEU2 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.39■□□□□ 0.7
Ccdc188F6WEU2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc188F6WEU2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc188F6WEU2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms