Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sh2d4bA6X942 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh2d4bA6X942 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh2d4bA6X942 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh2d4bA6X942 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh2d4bA6X942 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh2d4bA6X942 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh2d4bA6X942 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sh2d4bA6X942 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh2d4bA6X942 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Mir7071-201ENSMUST00000184847 69 ntBASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh2d4bA6X942 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Gm7290-201ENSMUST00000104990 617 ntBASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Gm12918-201ENSMUST00000120234 636 ntBASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Gm15710-201ENSMUST00000121821 636 ntBASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Gm5075-201ENSMUST00000196916 622 ntBASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Sh2d4bA6X942 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Gm5408-201ENSMUST00000197998 747 ntBASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Sh2d4bA6X942 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sh2d4bA6X942 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Sh2d4bA6X942 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms