Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Shroom2A2ALU4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
Shroom2A2ALU4 Odf3b-204ENSMUST00000227834 930 ntBASIC30.64■■■□□ 2.5
Shroom2A2ALU4 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Shroom2A2ALU4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Shroom2A2ALU4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Shroom2A2ALU4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Shroom2A2ALU4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.49
Shroom2A2ALU4 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC30.63■■■□□ 2.49
Shroom2A2ALU4 Gm7860-201ENSMUST00000121190 879 ntBASIC30.63■■■□□ 2.49
Shroom2A2ALU4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom2A2ALU4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom2A2ALU4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Shroom2A2ALU4 Gm14859-201ENSMUST00000117752 357 ntBASIC30.63■■■□□ 2.49
Shroom2A2ALU4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC30.63■■■□□ 2.49
Shroom2A2ALU4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Shroom2A2ALU4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC30.62■■■□□ 2.49
Shroom2A2ALU4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Shroom2A2ALU4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Shroom2A2ALU4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC30.61■■■□□ 2.49
Shroom2A2ALU4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Shroom2A2ALU4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC30.61■■■□□ 2.49
Shroom2A2ALU4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Shroom2A2ALU4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Shroom2A2ALU4 Gm3375-201ENSMUST00000203929 796 ntBASIC30.6■■■□□ 2.49
Shroom2A2ALU4 AC133598.3-202ENSMUST00000224219 531 ntBASIC30.6■■■□□ 2.49
Shroom2A2ALU4 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Shroom2A2ALU4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Shroom2A2ALU4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Shroom2A2ALU4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Shroom2A2ALU4 AC154471.1-201ENSMUST00000224418 436 ntBASIC30.57■■■□□ 2.48
Shroom2A2ALU4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Shroom2A2ALU4 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC30.57■■■□□ 2.48
Shroom2A2ALU4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Shroom2A2ALU4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Shroom2A2ALU4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
Shroom2A2ALU4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Shroom2A2ALU4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Shroom2A2ALU4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
Shroom2A2ALU4 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Shroom2A2ALU4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Shroom2A2ALU4 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Shroom2A2ALU4 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Shroom2A2ALU4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Shroom2A2ALU4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Shroom2A2ALU4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Shroom2A2ALU4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Shroom2A2ALU4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC30.54■■■□□ 2.48
Shroom2A2ALU4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Shroom2A2ALU4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Shroom2A2ALU4 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Shroom2A2ALU4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Shroom2A2ALU4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC30.52■■■□□ 2.48
Shroom2A2ALU4 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Shroom2A2ALU4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Shroom2A2ALU4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Shroom2A2ALU4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Shroom2A2ALU4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Shroom2A2ALU4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Shroom2A2ALU4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC30.51■■■□□ 2.48
Shroom2A2ALU4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Shroom2A2ALU4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Shroom2A2ALU4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Shroom2A2ALU4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Shroom2A2ALU4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Shroom2A2ALU4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
Shroom2A2ALU4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms